Analysis of gene expression data using self-organizing maps.
نویسندگان
چکیده
DNA microarray technologies together with rapidly increasing genomic sequence information is leading to an explosion in available gene expression data. Currently there is a great need for efficient methods to analyze and visualize these massive data sets. A self-organizing map (SOM) is an unsupervised neural network learning algorithm which has been successfully used for the analysis and organization of large data files. We have here applied the SOM algorithm to analyze published data of yeast gene expression and show that SOM is an excellent tool for the analysis and visualization of gene expression profiles.
منابع مشابه
Landforms identification using neural network-self organizing map and SRTM data
During an 11 days mission in February 2000 the Shuttle Radar Topography Mission (SRTM) collected data over 80% of the Earth's land surface, for all areas between 60 degrees N and 56 degrees S latitude. Since SRTM data became available, many studies utilized them for application in topography and morphometric landscape analysis. Exploiting SRTM data for recognition and extraction of topographic ...
متن کاملOrdering Gene Expression Data Using One-dimensional Self-Organizing Maps
The microarray technology allows researchers to simultaneously measure gene expression levels of thousands of genes. Analysis of data produced by such experiments provides knowledge about the gene function. An important step in the analysis of gene expression data is the detection of genes with similar expression patterns. Real-time computational tools for organization and visualization are cru...
متن کاملGait Based Vertical Ground Reaction Force Analysis for Parkinson’s Disease Diagnosis Using Self Organizing Map
The aim of this work is to use Self Organizing Map (SOM) for clustering of locomotion kinetic characteristics in normal and Parkinson’s disease. The classification and analysis of the kinematic characteristics of human locomotion has been greatly increased by the use of artificial neural networks in recent years. The proposed methodology aims at overcoming the constraints of traditional analysi...
متن کاملGait Based Vertical Ground Reaction Force Analysis for Parkinson’s Disease Diagnosis Using Self Organizing Map
The aim of this work is to use Self Organizing Map (SOM) for clustering of locomotion kinetic characteristics in normal and Parkinson’s disease. The classification and analysis of the kinematic characteristics of human locomotion has been greatly increased by the use of artificial neural networks in recent years. The proposed methodology aims at overcoming the constraints of traditional analysi...
متن کاملGreen Product Consumers Segmentation Using Self-Organizing Maps in Iran
This study aims to segment the market based on demographical, psychological, and behavioral variables, and seeks to investigate their relationship with green consumer behavior. In this research, self-organizing maps are used to segment and to determine the features of green consumer behavior. This was a survey type of research study in which eight variables were selected from the demographical,...
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
برای دانلود متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید
ثبت ناماگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید
ورودعنوان ژورنال:
- FEBS letters
دوره 451 2 شماره
صفحات -
تاریخ انتشار 1999